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ITPR3 inositol 1,4,5-trisphosphate receptor type 3 [ Calidris pugnax (ruff) ]

Gene ID: 106894748, updated on 11-Apr-2024

Summary

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Gene symbol
ITPR3
Gene description
inositol 1,4,5-trisphosphate receptor type 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
78
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090982.1 (744778..810868)

NW_015090982.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106894765 Neighboring gene uncharacterized LOC106894766 Neighboring gene ubiquinol-cytochrome-c reductase complex assembly factor 2 Neighboring gene inositol hexakisphosphate kinase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090982.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol 1,4,5 trisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol 1,4,5-trisphosphate-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol 1,4,5-trisphosphate receptor type 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090982.1 Reference ASM143184v1

    Range
    744778..810868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014953606.1 → XP_014809092.1  inositol 1,4,5-trisphosphate receptor type 3

    Conserved Domains (7) summary
    smart00472
    Location:232 → 288
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    pfam00520
    Location:3264 → 3507
    Ion_trans; Ion transport protein
    pfam01365
    Location:475 → 665
    RYDR_ITPR; RIH domain
    pfam02815
    Location:234 → 432
    MIR; MIR domain
    pfam08454
    Location:1866 → 1971
    RIH_assoc; RyR and IP3R Homology associated
    pfam08709
    Location:3 → 226
    Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor
    cl01224
    Location:3181 → 3241
    DUF805; Protein of unknown function (DUF805)
Nucleotide Protein
Heading Accession and Version

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