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EIF3B eukaryotic translation initiation factor 3 subunit B [ Calidris pugnax (ruff) ]

Gene ID: 106890400, updated on 13-Mar-2024

Summary

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Gene symbol
EIF3B
Gene description
eukaryotic translation initiation factor 3 subunit B
See related
Ensembl:ENSCPUG00000003095
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090876.1 (1394503..1407320, complement)

NW_015090876.1Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 12 Neighboring gene kinesin family member 19 Neighboring gene uncharacterized LOC106890412 Neighboring gene sorting nexin 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090876.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3 subunit B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090876.1 Reference ASM143184v1

    Range
    1394503..1407320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014946195.1 → XP_014801681.1  eukaryotic translation initiation factor 3 subunit B

    Related
    ENSCPUP00000004147.1, ENSCPUT00000005022.1
    Conserved Domains (3) summary
    COG5354
    Location:144 → 611
    COG5354; Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
    cd12278
    Location:23 → 103
    RRM_eIF3B; RNA recognition motif in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins
    sd00039
    Location:215 → 262
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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