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OPA1 OPA1 mitochondrial dynamin like GTPase [ Calidris pugnax (ruff) ]

Gene ID: 106890173, updated on 13-Mar-2024

Summary

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Gene symbol
OPA1
Gene description
OPA1 mitochondrial dynamin like GTPase
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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See OPA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090872.1 (7565566..7642235)

NW_015090872.1Genomic Context describing neighboring genes Neighboring gene ATPase 13A5 Neighboring gene phospholipase A and acyltransferase 1 Neighboring gene probable cation-transporting ATPase 13A4 Neighboring gene hes family bHLH transcription factor 1 Neighboring gene uncharacterized LOC106890174

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090872.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynamin-like 120 kDa protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090872.1 Reference ASM143184v1

    Range
    7565566..7642235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014945791.1 → XP_014801277.1  dynamin-like 120 kDa protein, mitochondrial

    Conserved Domains (3) summary
    PHA02682
    Location:72 → 226
    PHA02682; ORF080 virion core protein; Provisional
    cd08771
    Location:776 → 1050
    DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
    cl03075
    Location:701 → 764
    GrpE; nucleotide exchange factor GrpE
Nucleotide Protein
Heading Accession and Version

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