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ARHGAP5 Rho GTPase activating protein 5 [ Calidris pugnax (ruff) ]

Gene ID: 106887968, updated on 13-Mar-2024

Summary

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Gene symbol
ARHGAP5
Gene description
Rho GTPase activating protein 5
See related
Ensembl:ENSCPUG00000002644
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090839.1 (9255844..9308330, complement)

NW_015090839.1Genomic Context describing neighboring genes Neighboring gene neuronal PAS domain protein 3 Neighboring gene uncharacterized LOC106887966 Neighboring gene A-kinase anchoring protein 6 Neighboring gene uncharacterized LOC106887932 Neighboring gene NUBP iron-sulfur cluster assembly factor, mitochondrial Neighboring gene D-aminoacyl-tRNA deacylase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090839.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090839.1 Reference ASM143184v1

    Range
    9255844..9308330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014941826.1 → XP_014797312.1  rho GTPase-activating protein 5

    Related
    ENSCPUP00000003460.1, ENSCPUT00000004193.1
    Conserved Domains (5) summary
    smart00441
    Location:429 → 481
    FF; Contains two conserved F residues
    smart00175
    Location:28 → 244
    RAB; Rab subfamily of small GTPases
    cd04373
    Location:1262 → 1446
    RhoGAP_p190; RhoGAP_p190: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of p190-like proteins. p190, also named RhoGAP5, plays a role in neuritogenesis and axon branch stability. p190 shows a preference for Rho, over Rac and Cdc42, and ...
    pfam16512
    Location:260 → 338
    RhoGAP-FF1; p190-A and -B Rho GAPs FF domain
    cl21455
    Location:31 → 246
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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