U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HS2ST1 heparan sulfate 2-O-sulfotransferase 1 [ Calidris pugnax (ruff) ]

Gene ID: 106886225, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
HS2ST1
Gene description
heparan sulfate 2-O-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090812.1 (14942822..15025581)

NW_015090812.1Genomic Context describing neighboring genes Neighboring gene chloride channel accessory 4 Neighboring gene SH3 domain containing GRB2 like, endophilin B1 Neighboring gene selenoprotein F Neighboring gene uncharacterized LOC106886307 Neighboring gene LIM domain only 4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015090812.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan sulfate 2-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090812.1 Reference ASM143184v1

    Range
    14942822..15025581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014938956.1 → XP_014794442.1  heparan sulfate 2-O-sulfotransferase 1

    Conserved Domains (1) summary
    pfam03567
    Location:139 → 394
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.