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EPB41L4B erythrocyte membrane protein band 4.1 like 4B [ Calidris pugnax (ruff) ]

Gene ID: 106886014, updated on 13-Mar-2024

Summary

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Gene symbol
EPB41L4B
Gene description
erythrocyte membrane protein band 4.1 like 4B
See related
Ensembl:ENSCPUG00000005289
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090810.1 (3735362..3904671, complement)

NW_015090810.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 245 Neighboring gene ferric chelate reductase 1 like Neighboring gene uncharacterized LOC106885949 Neighboring gene uncharacterized LOC106885955

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090810.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
band 4.1-like protein 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090810.1 Reference ASM143184v1

    Range
    3735362..3904671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014938607.1 → XP_014794093.1  band 4.1-like protein 4B isoform X3

    Conserved Domains (5) summary
    smart00295
    Location:88 → 278
    B41; Band 4.1 homologues
    cd13186
    Location:274 → 367
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    pfam00373
    Location:171 → 278
    FERM_M; FERM central domain
    pfam08736
    Location:380 → 420
    FA; FERM adjacent (FA)
    pfam09379
    Location:90 → 152
    FERM_N; FERM N-terminal domain

  2. XM_014938605.1 → XP_014794091.1  band 4.1-like protein 4B isoform X1

    Related
    ENSCPUP00000007331.1, ENSCPUT00000008839.1
    Conserved Domains (5) summary
    smart00295
    Location:88 → 278
    B41; Band 4.1 homologues
    cd13186
    Location:274 → 367
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    pfam00373
    Location:171 → 278
    FERM_M; FERM central domain
    pfam08736
    Location:380 → 420
    FA; FERM adjacent (FA)
    pfam09379
    Location:90 → 152
    FERM_N; FERM N-terminal domain

  3. XM_014938606.1 → XP_014794092.1  band 4.1-like protein 4B isoform X2

    Conserved Domains (5) summary
    smart00295
    Location:88 → 278
    B41; Band 4.1 homologues
    cd13186
    Location:274 → 367
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    pfam00373
    Location:171 → 278
    FERM_M; FERM central domain
    pfam08736
    Location:380 → 420
    FA; FERM adjacent (FA)
    pfam09379
    Location:90 → 152
    FERM_N; FERM N-terminal domain

  4. XM_014938608.1 → XP_014794094.1  band 4.1-like protein 4B isoform X4

    Conserved Domains (5) summary
    smart00295
    Location:88 → 278
    B41; Band 4.1 homologues
    cd13186
    Location:274 → 367
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    pfam00373
    Location:171 → 278
    FERM_M; FERM central domain
    pfam08736
    Location:380 → 420
    FA; FERM adjacent (FA)
    pfam09379
    Location:90 → 152
    FERM_N; FERM N-terminal domain

  5. XM_014938609.1 → XP_014794095.1  band 4.1-like protein 4B isoform X5

    Related
    ENSCPUP00000007335.1, ENSCPUT00000008844.1
    Conserved Domains (6) summary
    smart00295
    Location:88 → 278
    B41; Band 4.1 homologues
    cd13186
    Location:274 → 367
    FERM_C_NBL4_NBL5; FERM domain C-lobe of Novel band 4.1-like protein 4 and 5 (NBL4 and 5)
    pfam00373
    Location:171 → 278
    FERM_M; FERM central domain
    pfam08736
    Location:380 → 420
    FA; FERM adjacent (FA)
    pfam09379
    Location:90 → 152
    FERM_N; FERM N-terminal domain
    pfam14179
    Location:446 → 519
    YppG; YppG-like protein
Nucleotide Protein
Heading Accession and Version

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