U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NR2F1 nuclear receptor subfamily 2 group F member 1 [ Calidris pugnax (ruff) ]

Gene ID: 106885050, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NR2F1
Gene description
nuclear receptor subfamily 2 group F member 1
See related
Ensembl:ENSCPUG00000018893
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090796.1 (1259460..1269433, complement)

NW_015090796.1Genomic Context describing neighboring genes Neighboring gene KIAA0825 ortholog Neighboring gene SMC5-SMC6 complex localization factor 1 Neighboring gene ARB2 cotranscriptional regulator A Neighboring gene uncharacterized LOC106885027 Neighboring gene inositol 1,4,5-trisphosphate receptor-interacting protein-like 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015090796.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
COUP transcription factor 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090796.1 Reference ASM143184v1

    Range
    1259460..1269433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014936877.1 → XP_014792363.1  COUP transcription factor 1

    Related
    ENSCPUP00000028086.1, ENSCPUT00000033043.1
    Conserved Domains (2) summary
    cd06948
    Location:181 → 416
    NR_LBD_COUP-TF; Ligand binding domain of chicken ovalbumin upstream promoter transcription factors, a member of the nuclear receptor family
    cd06958
    Location:83 → 155
    NR_DBD_COUP_TF; DNA-binding domain of chicken ovalbumin upstream promoter transcription factors (COUP-TFs) is composed of two C4-type zinc fingers
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.