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SNRNP25 small nuclear ribonucleoprotein U11/U12 subunit 25 [ Calidris pugnax (ruff) ]

Gene ID: 106884688, updated on 13-Mar-2024

Summary

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Gene symbol
SNRNP25
Gene description
small nuclear ribonucleoprotein U11/U12 subunit 25
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090794.1 (11953984..11958025)

NW_015090794.1Genomic Context describing neighboring genes Neighboring gene katanin interacting protein Neighboring gene general transcription factor IIIC subunit 1 Neighboring gene rhomboid 5 homolog 1 Neighboring gene N-methylpurine DNA glycosylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090794.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U11/U12 small nuclear ribonucleoprotein 25 kDa protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090794.1 Reference ASM143184v1

    Range
    11953984..11958025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014936213.1 → XP_014791699.1  U11/U12 small nuclear ribonucleoprotein 25 kDa protein

    Conserved Domains (2) summary
    cd01769
    Location:66 → 152
    UBL; Ubiquitin-like domain of UBL
    smart00213
    Location:65 → 147
    UBQ; Ubiquitin homologues
Nucleotide Protein
Heading Accession and Version

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