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RLF RLF zinc finger [ Sturnus vulgaris (Common starling) ]

Gene ID: 106856135, updated on 13-Mar-2024

Summary

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Gene symbol
RLF
Gene description
RLF zinc finger
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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See RLF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650591.1 (1292688..1338611)

NW_014650591.1Genomic Context describing neighboring genes Neighboring gene MYC binding protein Neighboring gene gap junction protein alpha 9 Neighboring gene zinc metallopeptidase STE24 Neighboring gene lysine demethylase 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650591.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein Rlf
Names
rearranged L-myc fusion

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650591.1 Reference Sturnus_vulgaris-1.0

    Range
    1292688..1338611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014881276.1 → XP_014736762.1  zinc finger protein Rlf isoform X1

    Conserved Domains (3) summary
    COG5236
    Location:651 → 800
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:694 → 714
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1125 → 1146
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_014881277.1 → XP_014736763.1  zinc finger protein Rlf isoform X2

    Conserved Domains (3) summary
    COG5236
    Location:619 → 768
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:662 → 682
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1093 → 1114
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_014881278.1 → XP_014736764.1  zinc finger protein Rlf isoform X3

    Conserved Domains (3) summary
    COG5236
    Location:463 → 612
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:506 → 526
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:937 → 958
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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