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ZFX zinc finger protein X-linked [ Sturnus vulgaris (Common starling) ]

Gene ID: 106855242, updated on 13-Mar-2024

Summary

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Gene symbol
ZFX
Gene description
zinc finger protein X-linked
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650572.1 (1579929..1603747)

NW_014650572.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 15 Neighboring gene eukaryotic translation initiation factor 2 subunit gamma Neighboring gene organic solute transporter subunit alpha-like Neighboring gene pyruvate dehydrogenase kinase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650572.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger X-chromosomal protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650572.1 Reference Sturnus_vulgaris-1.0

    Range
    1579929..1603747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014879733.1 → XP_014735219.1  zinc finger X-chromosomal protein

    Conserved Domains (4) summary
    COG5048
    Location:532 → 790
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:479 → 499
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam04704
    Location:71 → 398
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    cl19880
    Location:415 → 446
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  2. XM_014879734.1 → XP_014735220.1  zinc finger X-chromosomal protein

    Conserved Domains (4) summary
    COG5048
    Location:532 → 790
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:479 → 499
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam04704
    Location:71 → 398
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    cl19880
    Location:415 → 446
    ROS_MUCR; ROS/MUCR transcriptional regulator protein

  3. XM_014879732.1 → XP_014735218.1  zinc finger X-chromosomal protein

    Conserved Domains (4) summary
    COG5048
    Location:532 → 790
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:479 → 499
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam04704
    Location:71 → 398
    Zfx_Zfy_act; Zfx / Zfy transcription activation region
    cl19880
    Location:415 → 446
    ROS_MUCR; ROS/MUCR transcriptional regulator protein
Nucleotide Protein
Heading Accession and Version

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