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C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Sturnus vulgaris (Common starling) ]

Gene ID: 106854517, updated on 13-Mar-2024

Summary

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Gene symbol
C1GALT1
Gene description
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650559.1 (888927..897994)

NW_014650559.1Genomic Context describing neighboring genes Neighboring gene tachykinin precursor 1 Neighboring gene asparagine synthetase (glutamine-hydrolyzing) Neighboring gene collagen type XXVIII alpha 1 chain Neighboring gene meiosis regulator for oocyte development

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650559.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650559.1 Reference Sturnus_vulgaris-1.0

    Range
    888927..897994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014878505.1 → XP_014733991.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X4

    Conserved Domains (1) summary
    cl21608
    Location:108 → 249
    Galactosyl_T; Galactosyltransferase

  2. XM_014878504.1 → XP_014733990.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cl21608
    Location:151 → 292
    Galactosyl_T; Galactosyltransferase

  3. XM_014878503.1 → XP_014733989.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cl21608
    Location:159 → 300
    Galactosyl_T; Galactosyltransferase

  4. XM_014878506.1 → XP_014733992.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X4

    Conserved Domains (1) summary
    cl21608
    Location:108 → 249
    Galactosyl_T; Galactosyltransferase

  5. XM_014878501.1 → XP_014733987.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cl21608
    Location:159 → 300
    Galactosyl_T; Galactosyltransferase

  6. XM_014878502.1 → XP_014733988.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cl21608
    Location:159 → 300
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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