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ZNF236 zinc finger protein 236 [ Sturnus vulgaris (Common starling) ]

Gene ID: 106852500, updated on 13-Mar-2024

Summary

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Gene symbol
ZNF236
Gene description
zinc finger protein 236
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650526.1 (3657573..3729240, complement)

NW_014650526.1Genomic Context describing neighboring genes Neighboring gene galanin receptor 1 Neighboring gene myelin basic protein Neighboring gene zinc finger protein 516 Neighboring gene uncharacterized LOC106852493 Neighboring gene teashirt zinc finger homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650526.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 236

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650526.1 Reference Sturnus_vulgaris-1.0

    Range
    3657573..3729240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014875162.1 → XP_014730648.1  zinc finger protein 236 isoform X1

    Conserved Domains (5) summary
    COG5048
    Location:140 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:144 → 164
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1223 → 1243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:142 → 164
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:1151 → 1175
    zf-H2C2_2; Zinc-finger double domain

  2. XM_014875163.1 → XP_014730649.1  zinc finger protein 236 isoform X2

    Conserved Domains (5) summary
    COG5048
    Location:140 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:144 → 164
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1222 → 1242
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:142 → 164
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:1150 → 1174
    zf-H2C2_2; Zinc-finger double domain

  3. XM_014875166.1 → XP_014730652.1  zinc finger protein 236 isoform X4

    Conserved Domains (5) summary
    COG5048
    Location:140 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:144 → 164
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1152 → 1172
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:142 → 164
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:1080 → 1104
    zf-H2C2_2; Zinc-finger double domain

  4. XM_014875164.1 → XP_014730650.1  zinc finger protein 236 isoform X3

    Conserved Domains (5) summary
    COG5048
    Location:140 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:144 → 164
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1223 → 1243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:142 → 164
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:1151 → 1175
    zf-H2C2_2; Zinc-finger double domain

  5. XM_014875167.1 → XP_014730653.1  zinc finger protein 236 isoform X5

    Conserved Domains (5) summary
    COG5048
    Location:140 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:144 → 164
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1223 → 1243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:142 → 164
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:1151 → 1175
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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