U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHL1 cell adhesion molecule L1 like [ Sturnus vulgaris (Common starling) ]

Gene ID: 106851605, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CHL1
Gene description
cell adhesion molecule L1 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650463.1 (8650935..8775889)

NW_014650463.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106851595 Neighboring gene uncharacterized LOC106851592 Neighboring gene contactin 6 Neighboring gene contactin 4 Neighboring gene uncharacterized LOC106851641

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_014650463.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
neural cell adhesion molecule L1-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650463.1 Reference Sturnus_vulgaris-1.0

    Range
    8650935..8775889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014873744.1 → XP_014729230.1  neural cell adhesion molecule L1-like protein isoform X2

    Conserved Domains (9) summary
    cd05731
    Location:275 → 345
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05733
    Location:53 → 127
    Ig6_L1-CAM_like; Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    cd05845
    Location:130 → 224
    Ig2_L1-CAM_like; Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    smart00408
    Location:454 → 517
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:264 → 344
    IG_like; Immunoglobulin like
    cd00063
    Location:628 → 717
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:35 → 128
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:1121 → 1206
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:362 → 435
    Ig; Immunoglobulin domain

  2. XM_014873727.1 → XP_014729213.1  neural cell adhesion molecule L1-like protein isoform X1

    Conserved Domains (9) summary
    cd05731
    Location:275 → 345
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05733
    Location:53 → 127
    Ig6_L1-CAM_like; Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    cd05845
    Location:130 → 224
    Ig2_L1-CAM_like; Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    smart00408
    Location:454 → 517
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:264 → 344
    IG_like; Immunoglobulin like
    cd00063
    Location:628 → 717
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:35 → 128
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:1067 → 1152
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:362 → 435
    Ig; Immunoglobulin domain

  3. XM_014873709.1 → XP_014729195.1  neural cell adhesion molecule L1-like protein isoform X1

    Conserved Domains (9) summary
    cd05731
    Location:275 → 345
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05733
    Location:53 → 127
    Ig6_L1-CAM_like; Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    cd05845
    Location:130 → 224
    Ig2_L1-CAM_like; Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    smart00408
    Location:454 → 517
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:264 → 344
    IG_like; Immunoglobulin like
    cd00063
    Location:628 → 717
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:35 → 128
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:1067 → 1152
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:362 → 435
    Ig; Immunoglobulin domain

  4. XM_014873718.1 → XP_014729204.1  neural cell adhesion molecule L1-like protein isoform X1

    Conserved Domains (9) summary
    cd05731
    Location:275 → 345
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05733
    Location:53 → 127
    Ig6_L1-CAM_like; Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    cd05845
    Location:130 → 224
    Ig2_L1-CAM_like; Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    smart00408
    Location:454 → 517
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:264 → 344
    IG_like; Immunoglobulin like
    cd00063
    Location:628 → 717
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:35 → 128
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:1067 → 1152
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:362 → 435
    Ig; Immunoglobulin domain

  5. XM_014873734.1 → XP_014729220.1  neural cell adhesion molecule L1-like protein isoform X1

    Conserved Domains (9) summary
    cd05731
    Location:275 → 345
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05733
    Location:53 → 127
    Ig6_L1-CAM_like; Sixth immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    cd05845
    Location:130 → 224
    Ig2_L1-CAM_like; Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins
    smart00408
    Location:454 → 517
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:264 → 344
    IG_like; Immunoglobulin like
    cd00063
    Location:628 → 717
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:35 → 128
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:1067 → 1152
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:362 → 435
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.