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PIDD1 p53-induced death domain protein 1 [ Sturnus vulgaris (Common starling) ]

Gene ID: 106851559, updated on 13-Mar-2024

Summary

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Gene symbol
PIDD1
Gene description
p53-induced death domain protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650515.1 (4291443..4306420, complement)

NW_014650515.1Genomic Context describing neighboring genes Neighboring gene interferon regulatory factor 7 Neighboring gene solute carrier family 25 member 22 Neighboring gene endogenous retrovirus group S71 member 1, envelope Neighboring gene ribosomal protein lateral stalk subunit P2 Neighboring gene patatin like phospholipase domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650515.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
p53-induced death domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650515.1 Reference Sturnus_vulgaris-1.0

    Range
    4291443..4306420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014873634.1 → XP_014729120.1  p53-induced death domain-containing protein 1

    Conserved Domains (6) summary
    cd00116
    Location:117 → 325
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cd08779
    Location:780 → 865
    Death_PIDD; Death Domain of p53-induced protein with a death domain
    sd00033
    Location:85 → 119
    LRR_RI; leucine-rich repeat [structural motif]
    pfam10461
    Location:412 → 445
    Peptidase_S68; Peptidase S68
    pfam13855
    Location:213 → 266
    LRR_8; Leucine rich repeat
    cl02517
    Location:316 → 406
    ZU5; ZU5 domain
Nucleotide Protein
Heading Accession and Version

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