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CACNA1D calcium voltage-gated channel subunit alpha1 D [ Sturnus vulgaris (Common starling) ]

Gene ID: 106849165, updated on 13-Mar-2024

Summary

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Gene symbol
CACNA1D
Gene description
calcium voltage-gated channel subunit alpha1 D
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
50
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650485.1 (1117721..1285922, complement)

NW_014650485.1Genomic Context describing neighboring genes Neighboring gene actin related protein 8 Neighboring gene choline dehydrogenase Neighboring gene decapping mRNA 1A Neighboring gene transketolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650485.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent L-type calcium channel subunit alpha-1D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650485.1 Reference Sturnus_vulgaris-1.0

    Range
    1117721..1285922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014869597.1 → XP_014725083.1  voltage-dependent L-type calcium channel subunit alpha-1D isoform X2

    Conserved Domains (4) summary
    pfam00520
    Location:1241 → 1492
    Ion_trans; Ion transport protein
    pfam08763
    Location:1565 → 1636
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1938 → 2174
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1500 → 1563
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  2. XM_014869596.1 → XP_014725082.1  voltage-dependent L-type calcium channel subunit alpha-1D isoform X1

    Conserved Domains (4) summary
    pfam00520
    Location:820 → 1086
    Ion_trans; Ion transport protein
    pfam08763
    Location:1159 → 1230
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1532 → 1768
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1094 → 1157
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
Nucleotide Protein
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