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PKD2L2 polycystin 2 like 2, transient receptor potential cation channel [ Equus asinus (ass) ]

Gene ID: 106839243, updated on 13-Mar-2024

Summary

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Gene symbol
PKD2L2
Gene description
polycystin 2 like 2, transient receptor potential cation channel
See related
Ensembl:ENSEASG00005020612
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 12 NC_052188.1 (15759685..15801197)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638092.1 (7024065..7063276)

Chromosome 12 - NC_052188.1Genomic Context describing neighboring genes Neighboring gene neuropeptide Y receptor type 6-like Neighboring gene myotilin Neighboring gene family with sequence similarity 13 member B Neighboring gene high mobility group protein B1-like Neighboring gene Wnt family member 8A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystic kidney disease 2-like 2 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052188.1 Reference ASM1607732v2

    Range
    15759685..15801197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044780537.1 → XP_044636472.1  polycystic kidney disease 2-like 2 protein isoform X1

    UniProtKB/TrEMBL
    A0A8C4MZL0
    Related
    ENSEASP00005030265.2, ENSEAST00005032905.2
    Conserved Domains (1) summary
    PLN03223
    Location:308 → 647
    PLN03223; Polycystin cation channel protein; Provisional

  2. XM_044780539.1 → XP_044636474.1  polycystic kidney disease 2-like 2 protein isoform X2

    UniProtKB/TrEMBL
    A0A8C4MZL0
    Conserved Domains (1) summary
    PLN03223
    Location:308 → 636
    PLN03223; Polycystin cation channel protein; Provisional
Nucleotide Protein
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