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FAM13B family with sequence similarity 13 member B [ Equus asinus (ass) ]

Gene ID: 106839201, updated on 13-Mar-2024

Summary

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Gene symbol
FAM13B
Gene description
family with sequence similarity 13 member B
See related
Ensembl:ENSEASG00005020624
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
26
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 12 NC_052188.1 (15797836..15896310, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638092.1 (7058489..7157702, complement)

Chromosome 12 - NC_052188.1Genomic Context describing neighboring genes Neighboring gene neuropeptide Y receptor type 6-like Neighboring gene myotilin Neighboring gene polycystin 2 like 2, transient receptor potential cation channel Neighboring gene high mobility group protein B1-like Neighboring gene Wnt family member 8A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM13B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052188.1 Reference ASM1607732v2

    Range
    15797836..15896310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044780535.1 → XP_044636470.1  protein FAM13B isoform X1

    UniProtKB/TrEMBL
    A0A8C4MR21
    Conserved Domains (2) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound ...
    cl26235
    Location:912 → 951
    RecQL4_SLD2_NTD; N-terminal homeodomain-like domain of metazoan RecQ protein-like 4 (RecQL4), fungal DNA replication regulator SLD2 and similar proteins

  2. XM_014853789.2 → XP_014709275.1  protein FAM13B isoform X9

    UniProtKB/TrEMBL
    A0A8C4MR21
    Conserved Domains (1) summary
    cl02570
    Location:1 → 87
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...

  3. XM_014853782.2 → XP_014709268.1  protein FAM13B isoform X3

    UniProtKB/TrEMBL
    A0A8C4MR21, A0A8C4MSC4
    Related
    ENSEASP00005030279.1, ENSEAST00005032921.2
    Conserved Domains (1) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...

  4. XM_014853785.2 → XP_014709271.1  protein FAM13B isoform X6

    UniProtKB/TrEMBL
    A0A9L0K810
    Related
    ENSEASP00005057465.1, ENSEAST00005059809.1
    Conserved Domains (1) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...

  5. XM_014853778.2 → XP_014709264.1  protein FAM13B isoform X1

    UniProtKB/TrEMBL
    A0A8C4MR21
    Conserved Domains (2) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound ...
    cl26235
    Location:912 → 951
    RecQL4_SLD2_NTD; N-terminal homeodomain-like domain of metazoan RecQ protein-like 4 (RecQL4), fungal DNA replication regulator SLD2 and similar proteins

  6. XM_014853783.2 → XP_014709269.1  protein FAM13B isoform X5

    UniProtKB/TrEMBL
    A0A8C4MR21
    Conserved Domains (1) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...

  7. XM_014853780.2 → XP_014709266.1  protein FAM13B isoform X2

    UniProtKB/TrEMBL
    A0A8C4MQ95, A0A9L0K810
    Related
    ENSEASP00005030283.2, ENSEAST00005032925.2
    Conserved Domains (1) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...

  8. XM_014853781.2 → XP_014709267.1  protein FAM13B isoform X4

    UniProtKB/TrEMBL
    A0A8C4MQR6, A0A9L0K810
    Related
    ENSEASP00005030286.2, ENSEAST00005032929.2
    Conserved Domains (1) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...

  9. XM_044780536.1 → XP_044636471.1  protein FAM13B isoform X8

    UniProtKB/TrEMBL
    A0A8C4MR21
    Conserved Domains (2) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound ...
    cl26235
    Location:577 → 641
    RecQL4_SLD2_NTD; N-terminal homeodomain-like domain of metazoan RecQ protein-like 4 (RecQL4), fungal DNA replication regulator SLD2 and similar proteins

  10. XM_014853787.2 → XP_014709273.1  protein FAM13B isoform X7

    UniProtKB/TrEMBL
    A0A8C4MR21
    Conserved Domains (1) summary
    cd04393
    Location:19 → 205
    RhoGAP_FAM13A1a; RhoGAP_FAM13A1a: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of FAM13A1, isoform a-like proteins. The function of FAM13A1a is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active ...
Nucleotide Protein
Heading Accession and Version

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