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TAF12 TATA-box binding protein associated factor 12 [ Equus asinus (ass) ]

Gene ID: 106839126, updated on 13-Mar-2024

Summary

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Gene symbol
TAF12
Gene description
TATA-box binding protein associated factor 12
See related
Ensembl:ENSEASG00005010142
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 5 NC_052181.1 (22905734..22931367, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638090.1 (1156385..1182626, complement)

Chromosome 5 - NC_052181.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123285766 Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene RAB42, member RAS oncogene family Neighboring gene uncharacterized LOC123285768 Neighboring gene U11 spliceosomal RNA Neighboring gene glucocorticoid modulatory element binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in RNA polymerase II preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SLIK (SAGA-like) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052181.1 Reference ASM1607732v2

    Range
    22905734..22931367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014853653.2 → XP_014709139.1  transcription initiation factor TFIID subunit 12 isoform X2

    UniProtKB/TrEMBL
    A0A9L0J7W0
    Conserved Domains (1) summary
    cd07981
    Location:57 → 128
    TAF12; TATA Binding Protein (TBP) Associated Factor 12 (TAF12) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex

  2. XM_014853654.2 → XP_014709140.1  transcription initiation factor TFIID subunit 12 isoform X2

    UniProtKB/TrEMBL
    A0A9L0J7W0
    Conserved Domains (1) summary
    cd07981
    Location:57 → 128
    TAF12; TATA Binding Protein (TBP) Associated Factor 12 (TAF12) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex

  3. XM_044770192.1 → XP_044626127.1  transcription initiation factor TFIID subunit 12 isoform X1

    UniProtKB/TrEMBL
    A0A9L0J6V0, A0A9L0J7W0
    Related
    ENSEASP00005048088.1, ENSEAST00005038486.1
    Conserved Domains (1) summary
    cd07981
    Location:110 → 178
    TAF12; TATA Binding Protein (TBP) Associated Factor 12
Nucleotide Protein
Heading Accession and Version

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