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PWWP3A PWWP domain containing 3A, DNA repair factor [ Equus asinus (ass) ]

Gene ID: 106834187, updated on 13-Mar-2024

Summary

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Gene symbol
PWWP3A
Gene description
PWWP domain containing 3A, DNA repair factor
See related
Ensembl:ENSEASG00005021697
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 20 NC_052196.1 (753676..779815)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014637966.1 (1232866..1257646, complement)

Chromosome 20 - NC_052196.1Genomic Context describing neighboring genes Neighboring gene ephrin A2 Neighboring gene uncharacterized LOC123279144 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene NADH:ubiquinone oxidoreductase core subunit S7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PWWP domain-containing DNA repair factor 3A
Names
PWWP domain-containing protein MUM1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052196.1 Reference ASM1607732v2

    Range
    753676..779815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044753611.1 → XP_044609546.1  PWWP domain-containing DNA repair factor 3A isoform X2

    UniProtKB/TrEMBL
    A0A9L0IKH4
    Conserved Domains (1) summary
    cd06080
    Location:313 → 392
    MUM1_like; Mutated melanoma-associated antigen 1 (MUM-1) is a melanoma-associated antigen (MAA). MUM-1 belongs to the mutated or aberrantly expressed type of MAAs, along with antigens such as CDK4, beta-catenin, gp100-in4, p15, and N-acetylglucosaminyltransferase ...

  2. XM_044753609.1 → XP_044609544.1  PWWP domain-containing DNA repair factor 3A isoform X1

    UniProtKB/TrEMBL
    A0A8C4N4G0, A0A9L0INX6
    Related
    ENSEASP00005038788.1, ENSEAST00005041024.1
    Conserved Domains (2) summary
    cd06080
    Location:370 → 449
    MUM1_like; Mutated melanoma-associated antigen 1 (MUM-1) is a melanoma-associated antigen (MAA). MUM-1 belongs to the mutated or aberrantly expressed type of MAAs, along with antigens such as CDK4, beta-catenin, gp100-in4, p15, and N-acetylglucosaminyltransferase ...
    PHA03307
    Location:103 → 326
    PHA03307; transcriptional regulator ICP4; Provisional

  3. XM_044753610.1 → XP_044609545.1  PWWP domain-containing DNA repair factor 3A isoform X1

    UniProtKB/TrEMBL
    A0A8C4N4G0, A0A9L0INX6
    Conserved Domains (2) summary
    cd06080
    Location:370 → 449
    MUM1_like; Mutated melanoma-associated antigen 1 (MUM-1) is a melanoma-associated antigen (MAA). MUM-1 belongs to the mutated or aberrantly expressed type of MAAs, along with antigens such as CDK4, beta-catenin, gp100-in4, p15, and N-acetylglucosaminyltransferase ...
    PHA03307
    Location:103 → 326
    PHA03307; transcriptional regulator ICP4; Provisional

  4. XM_044753612.1 → XP_044609547.1  PWWP domain-containing DNA repair factor 3A isoform X2

    UniProtKB/TrEMBL
    A0A9L0IKH4
    Conserved Domains (1) summary
    cd06080
    Location:313 → 392
    MUM1_like; Mutated melanoma-associated antigen 1 (MUM-1) is a melanoma-associated antigen (MAA). MUM-1 belongs to the mutated or aberrantly expressed type of MAAs, along with antigens such as CDK4, beta-catenin, gp100-in4, p15, and N-acetylglucosaminyltransferase ...
Nucleotide Protein
Heading Accession and Version

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