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SLF2 SMC5-SMC6 complex localization factor 2 [ Equus asinus (ass) ]

Gene ID: 106828842, updated on 13-Mar-2024

Summary

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Gene symbol
SLF2
Gene description
SMC5-SMC6 complex localization factor 2
See related
Ensembl:ENSEASG00005008951
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 2 NC_052178.1 (75130329..75172840, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014637157.1 (2431757..2452626)

Chromosome 2 - NC_052178.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L43 Neighboring gene semaphorin 4G Neighboring gene uncharacterized LOC123278760 Neighboring gene uncharacterized LOC123283339

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SMC5-SMC6 complex localization factor protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052178.1 Reference ASM1607732v2

    Range
    75130329..75172840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044752469.1 → XP_044608404.1  SMC5-SMC6 complex localization factor protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C4LM98, A0A8C4LS82
    Related
    ENSEASP00005012810.1, ENSEAST00005013920.2

  2. XM_044752471.1 → XP_044608406.1  SMC5-SMC6 complex localization factor protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C4LM98
    Conserved Domains (1) summary
    PTZ00108
    Location:245 → 515
    PTZ00108; DNA topoisomerase 2-like protein; Provisional

  3. XM_044752474.1 → XP_044608409.1  SMC5-SMC6 complex localization factor protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C4LM98

  4. XM_044752478.1 → XP_044608413.1  SMC5-SMC6 complex localization factor protein 2 isoform X4

  5. XM_014842052.2 → XP_014697538.1  SMC5-SMC6 complex localization factor protein 2 isoform X5

Nucleotide Protein
Heading Accession and Version

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