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STAT5B signal transducer and activator of transcription 5B [ Equus asinus (ass) ]

Gene ID: 106826362, updated on 11-Apr-2024

Summary

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Gene symbol
STAT5B
Gene description
signal transducer and activator of transcription 5B
See related
Ensembl:ENSEASG00005009440
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 13 NC_052189.1 (43969844..44027742, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638702.1 (11454165..11478425, complement)

Chromosome 13 - NC_052189.1Genomic Context describing neighboring genes Neighboring gene hypocretin neuropeptide precursor Neighboring gene GH3 domain containing Neighboring gene uncharacterized LOC123276452 Neighboring gene signal transducer and activator of transcription 5A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway via JAK-STAT IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in growth hormone receptor signaling pathway via JAK-STAT IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to peptide hormone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: signal transducer and activator of transcription 5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052189.1 Reference ASM1607732v2

    Range
    43969844..44027742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044745962.1 → XP_044601897.1  LOW QUALITY PROTEIN: signal transducer and activator of transcription 5B

    UniProtKB/TrEMBL
    A0A9L0I5L2
    Related
    ENSEASP00005034870.1, ENSEAST00005044736.1
    Conserved Domains (4) summary
    cd10420
    Location:581 → 725
    SH2_STAT5b; Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) 5b proteins
    smart00964
    Location:2 → 125
    STAT_int; STAT protein, protein interaction domain
    cd16855
    Location:139 → 338
    STAT5_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 5 (STAT5)
    cd16849
    Location:340 → 497
    STAT5_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 5 (STAT5)
Nucleotide Protein
Heading Accession and Version

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