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PNPLA7 patatin like phospholipase domain containing 7 [ Equus asinus (ass) ]

Gene ID: 106822770, updated on 13-Mar-2024

Summary

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Gene symbol
PNPLA7
Gene description
patatin like phospholipase domain containing 7
See related
Ensembl:ENSEASG00005014099
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
35
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 10 NC_052186.1 (7526008..7614126)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638475.1 (485358..573402)

Chromosome 10 - NC_052186.1Genomic Context describing neighboring genes Neighboring gene diphthamide biosynthesis 7 Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene uncharacterized LOC106822773 Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor Neighboring gene ectonucleoside triphosphate diphosphohydrolase 8 Neighboring gene NADPH oxidase activator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052186.1 Reference ASM1607732v2

    Range
    7526008..7614126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044778242.1 → XP_044634177.1  patatin-like phospholipase domain-containing protein 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C4M6F0, A0A8C4MH42
    Related
    ENSEASP00005022466.2, ENSEAST00005024380.2
    Conserved Domains (2) summary
    cd07225
    Location:893 → 1198
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:564 → 672
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  2. XM_044778245.1 → XP_044634180.1  patatin-like phospholipase domain-containing protein 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C4MH42
    Conserved Domains (2) summary
    cd07225
    Location:892 → 1197
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:563 → 671
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  3. XM_044778247.1 → XP_044634182.1  patatin-like phospholipase domain-containing protein 7 isoform X4

    UniProtKB/TrEMBL
    A0A8C4MH42
    Conserved Domains (2) summary
    cd07225
    Location:813 → 1118
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:484 → 592
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  4. XM_044778244.1 → XP_044634179.1  patatin-like phospholipase domain-containing protein 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C4M6F0, A0A8C4MH42
    Conserved Domains (2) summary
    cd07225
    Location:893 → 1198
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:564 → 672
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  5. XM_044778243.1 → XP_044634178.1  patatin-like phospholipase domain-containing protein 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C4M6F0, A0A8C4MH42
    Conserved Domains (2) summary
    cd07225
    Location:893 → 1198
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:564 → 672
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  6. XM_044778246.1 → XP_044634181.1  patatin-like phospholipase domain-containing protein 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C4MH42
    Conserved Domains (2) summary
    cd07225
    Location:868 → 1173
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:539 → 647
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
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