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CHPT1 choline phosphotransferase 1 [ Equus caballus (horse) ]

Gene ID: 106782693, updated on 13-Mar-2024

Summary

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Official Symbol
CHPT1provided by VGNC
Official Full Name
choline phosphotransferase 1provided by VGNC
Primary source
VGNC:VGNC:16516
See related
Ensembl:ENSECAG00000019000
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 28
Exon count:
9
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 28 NC_009171.3 (26618340..26649514)
102 previous assembly EquCab2.0 (GCF_000002305.2) 28 NC_009171.2 (25578895..25600954)

Chromosome 28 - NC_009171.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111771118 Neighboring gene small nucleolar RNA U3 Neighboring gene myosin binding protein C1 Neighboring gene synaptonemal complex protein 3 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene U2 spliceosomal RNA Neighboring gene DNA damage regulated autophagy modulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009171.3 Reference EquCab3.0 Primary Assembly

    Range
    26618340..26649514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023631618.1 → XP_023487386.1  cholinephosphotransferase 1

    UniProtKB/TrEMBL
    F7BN81
    Related
    ENSECAP00000016595.3, ENSECAT00000020229.4
    Conserved Domains (1) summary
    cl00453
    Location:19 → 382
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

RNA

  1. XR_002804772.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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