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ZNF396 zinc finger protein 396 [ Myotis brandtii (Brandt's bat) ]

Gene ID: 106725940, updated on 30-Mar-2024

Summary

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Gene symbol
ZNF396
Gene description
zinc finger protein 396
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005357453.1 (2252507..2258618)

NW_005357453.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown open reading frame, human C18orf54 Neighboring gene uncharacterized LOC106725937 Neighboring gene glycine-rich protein DOT1-like Neighboring gene zinc finger protein 24 Neighboring gene zinc finger protein 271

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005357453.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 396

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005357453.1 Reference ASM41265v1

    Range
    2252507..2258618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014538885.1 → XP_014394371.1  zinc finger protein 396

    Conserved Domains (6) summary
    smart00431
    Location:43 → 112
    SCAN; leucine rich region
    COG5048
    Location:175 → 257
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:208 → 228
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:207 → 228
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:249 → 273
    zf-H2C2_2; Zinc-finger double domain
    cl02605
    Location:43 → 95
    SCAN; SCAN oligomerization domain
Nucleotide Protein
Heading Accession and Version

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