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ahi1 Abelson helper integration site 1 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106603564, updated on 13-Mar-2024

Summary

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Gene symbol
ahi1
Gene description
Abelson helper integration site 1
See related
Ensembl:ENSSSAG00000045210
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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See ahi1 in Genome Data Viewer
Location:
chromosome: ssa01
Exon count:
27
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa01 NC_059442.1 (43767356..43788450)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa01 NC_027300.1 (41237581..41258636)

Chromosome ssa01 - NC_059442.1Genomic Context describing neighboring genes Neighboring gene Wilms tumor 1 associated protein-like Neighboring gene microtubule-associated protein 7a Neighboring gene solute carrier family 18 member B1 Neighboring gene TUB like protein 4b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
jouberin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059442.1 Reference Ssal_v3.1

    Range
    43767356..43788450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014197421.2 → XP_014052896.1  jouberin isoform X1

    UniProtKB/TrEMBL
    A0A1S3RKV0
    Related
    ENSSSAP00000041912.1, ENSSSAT00000068383.2
    Conserved Domains (3) summary
    cd11812
    Location:1087 → 1138
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    sd00039
    Location:599 → 639
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:585 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_014197470.2 → XP_014052945.1  jouberin isoform X2

    UniProtKB/TrEMBL
    A0A1S3RKY4
    Conserved Domains (4) summary
    cd11812
    Location:1074 → 1125
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    COG2319
    Location:538 → 939
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:599 → 639
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:585 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_014197437.2 → XP_014052912.1  jouberin isoform X1

    UniProtKB/TrEMBL
    A0A1S3RKV0
    Conserved Domains (3) summary
    cd11812
    Location:1087 → 1138
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    sd00039
    Location:599 → 639
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:585 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_014197430.2 → XP_014052905.1  jouberin isoform X1

    UniProtKB/TrEMBL
    A0A1S3RKV0
    Conserved Domains (3) summary
    cd11812
    Location:1087 → 1138
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    sd00039
    Location:599 → 639
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:585 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_014197444.2 → XP_014052919.1  jouberin isoform X1

    UniProtKB/TrEMBL
    A0A1S3RKV0
    Conserved Domains (3) summary
    cd11812
    Location:1087 → 1138
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    sd00039
    Location:599 → 639
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:585 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_045718124.1 → XP_045574080.1  jouberin isoform X1

    UniProtKB/TrEMBL
    A0A1S3RKV0
    Conserved Domains (3) summary
    cd11812
    Location:1087 → 1138
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    sd00039
    Location:599 → 639
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:585 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_014197452.2 → XP_014052927.1  jouberin isoform X1

    UniProtKB/TrEMBL
    A0A1S3RKV0
    Conserved Domains (3) summary
    cd11812
    Location:1087 → 1138
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    sd00039
    Location:599 → 639
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:585 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  8. XM_014197460.2 → XP_014052935.1  jouberin isoform X1

    UniProtKB/TrEMBL
    A0A1S3RKV0
    Conserved Domains (3) summary
    cd11812
    Location:1087 → 1138
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    sd00039
    Location:599 → 639
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:585 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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