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fut10 fucosyltransferase 10 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106571416, updated on 13-Mar-2024

Summary

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Gene symbol
fut10
Gene description
fucosyltransferase 10
See related
Ensembl:ENSSSAG00000082882
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: ssa01
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa01 NC_059442.1 (163645049..163659606, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa01 NC_027300.1 (149425543..149439699, complement)

Chromosome ssa01 - NC_059442.1Genomic Context describing neighboring genes Neighboring gene alpha-(1,3)-fucosyltransferase 10-like Neighboring gene CD209 antigen-like protein A Neighboring gene pleckstrin and Sec7 domain containing 3, like Neighboring gene verrucotoxin subunit beta-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059442.1 Reference Ssal_v3.1

    Range
    163645049..163659606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014144497.2 → XP_013999972.1  alpha-(1,3)-fucosyltransferase 10

    UniProtKB/TrEMBL
    A0A1S3M9V7, A0A1S3MAH7
    Related
    ENSSSAP00000040331.2, ENSSSAT00000066550.2
    Conserved Domains (2) summary
    pfam00852
    Location:211 → 400
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:80 → 171
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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