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SNX8 sorting nexin 8 [ Thamnophis sirtalis ]

Gene ID: 106557350, updated on 13-Mar-2024

Summary

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Gene symbol
SNX8
Gene description
sorting nexin 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657687.1 (46547..73999, complement)

NW_013657687.1Genomic Context describing neighboring genes Neighboring gene mitochondrial rRNA methyltransferase 2 Neighboring gene eukaryotic translation initiation factor 3 subunit B Neighboring gene anoctamin 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013657687.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657687.1 Reference Thamnophis_sirtalis-6.0

    Range
    46547..73999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014076572.1 → XP_013932047.1  sorting nexin-8

    UniProtKB/TrEMBL
    A0A6I9Z5V5
    Conserved Domains (2) summary
    cd06866
    Location:54 → 157
    PX_SNX8_Mvp1p_like; The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p
    cd07597
    Location:174 → 419
    BAR_SNX8; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 8
Nucleotide Protein
Heading Accession and Version

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