Ldhal6b lactate dehydrogenase A-like 6B [Mus musculus (house mouse)] - Gene

Summary

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Official Symbol: Ldhal6bprovided by MGI
Official Full Name: lactate dehydrogenase A-like 6Bprovided by MGI
Primary source: MGI:2146830
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: LDHL; Ldhal; AI326310; 4933402O15Rik

Genomic context

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Location :: 17 A1; 17

Sequence :: Chromosome: 17; NC_000083.6 (5417323..5418767, complement)

See Ldhal6b in Epigenomics, MapViewer

Chromosome 17 - NC_000083.6 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

Bibliography

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GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from BioSystems

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Cysteine and methionine metabolism, organism-specific biosystem (from KEGG)
Cysteine and methionine metabolism, organism-specific biosystemCysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted f...
Cysteine and methionine metabolism, conserved biosystem (from KEGG)
Cysteine and methionine metabolism, conserved biosystemCysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted f...
Glycolysis / Gluconeogenesis, organism-specific biosystem (from KEGG)
Glycolysis / Gluconeogenesis, organism-specific biosystemGlycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabol...
Glycolysis / Gluconeogenesis, conserved biosystem (from KEGG)
Glycolysis / Gluconeogenesis, conserved biosystemGlycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabol...
Glycolysis and Gluconeogenesis, organism-specific biosystem (from WikiPathways)
Glycolysis and Gluconeogenesis, organism-specific biosystem
Glycolysis and Gluconeogenesis
Propanoate metabolism, organism-specific biosystem (from KEGG)
Propanoate metabolism, organism-specific biosystem
Propanoate metabolism
Propanoate metabolism, conserved biosystem (from KEGG)
Propanoate metabolism, conserved biosystem
Propanoate metabolism
Pyruvate metabolism, organism-specific biosystem (from KEGG)
Pyruvate metabolism, organism-specific biosystem
Pyruvate metabolism
Pyruvate metabolism, conserved biosystem (from KEGG)
Pyruvate metabolism, conserved biosystem
Pyruvate metabolism

General gene information

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Markers

Ldhal6b (e-PCR), detects polymorphism
- UniSTS:546839

AI326310 (e-PCR)
- UniSTS:160613

Homology

Homologs of the Ldhal6b gene: The Ldhal6b gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, and rat.
Map Viewer (Human, Rat)

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
molecular_function	ND No biological Data available more info
oxidoreductase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
biological_process	ND No biological Data available more info
glycolysis	IEA Inferred from Electronic Annotation more info
oxidation-reduction process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
mitochondrion	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: L-lactate dehydrogenase A-like 6B

Names: L-lactate dehydrogenase A-like 6B

NP_780558.1

EC 1.1.1.27

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_175349.2 → NP_780558.1 L-lactate dehydrogenase A-like 6B

Status: PROVISIONAL

Source sequence(s)

AY280363

UniProtKB/TrEMBL

Q8BVP2

Conserved Domains (2) summary

cd05293
Location:70 – 379
Blast Score: 1327

LDH_1; A subgroup of L-lactate dehydrogenases

TIGR01771
Location:75 – 375
Blast Score: 1038

L-LDH-NAD; L-lactate dehydrogenase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 103

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p1 C57BL/6J

Genomic

NC_000083.6 Reference GRCm38.p1 C57BL/6J

Range

5417323..5418767, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

AC_000039.1 Alternate Mm_Celera

Range

5959766..5961210, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Nucleotide		Protein	Strain
Heading	Accession and Version	Protein	Strain
genomic	AAHY01130782.1 (24135..25579)	None
genomic	AC166064.4 (200870..202314)	None
mRNA	AK077089.1	BAC36605.1	C57BL/6J
mRNA	AY280363.1	AAP35085.1
mRNA	BC061193.1	AAH61193.1