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ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 [ Thamnophis sirtalis ]

Gene ID: 106547930, updated on 13-Mar-2024

Summary

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Gene symbol
ADAMTS7
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013658750.1 (18707..58820)

NW_013658750.1Genomic Context describing neighboring genes Neighboring gene cytosolic iron-sulfur assembly component 2A Neighboring gene SPG11 vesicle trafficking associated, spatacsin Neighboring gene eukaryotic translation initiation factor 3 subunit J Neighboring gene CTD small phosphatase like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013658750.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013658750.1 Reference Thamnophis_sirtalis-6.0

    Range
    18707..58820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014065206.1 → XP_013920681.1  A disintegrin and metalloproteinase with thrombospondin motifs 7

    UniProtKB/TrEMBL
    A0A6I9Y2D2
    Conserved Domains (6) summary
    smart00209
    Location:542 → 594
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:243 → 450
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01421
    Location:243 → 453
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:61 → 176
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:699 → 810
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:494 → 531
    ADAM_CR; ADAM cysteine-rich
Nucleotide Protein
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