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PBLD phenazine biosynthesis like protein domain containing [ Thamnophis sirtalis ]

Gene ID: 106542774, updated on 13-Mar-2024

Summary

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Gene symbol
PBLD
Gene description
phenazine biosynthesis like protein domain containing
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013658151.1 (608018..620075, complement)

NW_013658151.1Genomic Context describing neighboring genes Neighboring gene EPH receptor A7 Neighboring gene discs large MAGUK scaffold protein 5 Neighboring gene heterogeneous nuclear ribonucleoprotein H3 Neighboring gene RUN and FYVE domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013658151.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phenazine biosynthesis-like domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013658151.1 Reference Thamnophis_sirtalis-6.0

    Range
    608018..620075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014058597.1 → XP_013914072.1  phenazine biosynthesis-like domain-containing protein

    UniProtKB/TrEMBL
    A0A6I9XJG0
    Conserved Domains (2) summary
    pfam02567
    Location:8 → 283
    PhzC-PhzF; Phenazine biosynthesis-like protein
    cl19724
    Location:1 → 239
    DAP_epimerase; Diaminopimelate epimerase
Nucleotide Protein
Heading Accession and Version

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