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PLA2G6 phospholipase A2 group VI [ Thamnophis sirtalis ]

Gene ID: 106539993, updated on 13-Mar-2024

Summary

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Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657939.1 (660681..689667)

NW_013657939.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 184B Neighboring gene MAF bZIP transcription factor F Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene solute carrier family 16 member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013657939.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657939.1 Reference Thamnophis_sirtalis-6.0

    Range
    660681..689667
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014054954.1 → XP_013910429.1  85/88 kDa calcium-independent phospholipase A2

    UniProtKB/TrEMBL
    A0A6I9XHD1
    Conserved Domains (4) summary
    cd07212
    Location:474 → 786
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:285 → 406
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:291 → 380
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]

  2. XM_014054953.1 → XP_013910428.1  85/88 kDa calcium-independent phospholipase A2

    UniProtKB/TrEMBL
    A0A6I9XHD1
    Conserved Domains (4) summary
    cd07212
    Location:474 → 786
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:285 → 406
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:291 → 380
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:286 → 314
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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