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MIB1 MIB E3 ubiquitin protein ligase 1 [ Thamnophis sirtalis ]

Gene ID: 106539558, updated on 13-Mar-2024

Summary

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Gene symbol
MIB1
Gene description
MIB E3 ubiquitin protein ligase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
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Genomic context

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See MIB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657694.1 (2211781..2260933, complement)

NW_013657694.1Genomic Context describing neighboring genes Neighboring gene GATA binding protein 6 Neighboring gene uncharacterized LOC106539787

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013657694.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MIB1
Names
mindbomb E3 ubiquitin protein ligase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657694.1 Reference Thamnophis_sirtalis-6.0

    Range
    2211781..2260933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014054368.1 → XP_013909843.1  E3 ubiquitin-protein ligase MIB1

    UniProtKB/TrEMBL
    A0A6I9XFL2
    Conserved Domains (7) summary
    COG0666
    Location:280 → 542
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd00204
    Location:310 → 438
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:192 → 280
    Ank_2; Ankyrin repeats (3 copies)
    pfam13920
    Location:730 → 773
    zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
    sd00045
    Location:348 → 379
    ANK; ANK repeat [structural motif]
    cl02529
    Location:221 → 270
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cl19548
    Location:87 → 239
    DUF515; Protein of unknown function (DUF515)
Nucleotide Protein
Heading Accession and Version

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