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LBX2 ladybird homeobox 2 [ Thamnophis sirtalis ]

Gene ID: 106538913, updated on 13-Mar-2024

Summary

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Gene symbol
LBX2
Gene description
ladybird homeobox 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
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Genomic context

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See LBX2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657872.1 (256917..260588)

NW_013657872.1Genomic Context describing neighboring genes Neighboring gene T cell leukemia homeobox 2 Neighboring gene polycomb group ring finger 1 Neighboring gene tetratricopeptide repeat domain 31 Neighboring gene coiled-coil domain containing 142

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013657872.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor LBX2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657872.1 Reference Thamnophis_sirtalis-6.0

    Range
    256917..260588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014053554.1 → XP_013909029.1  transcription factor LBX2

    UniProtKB/TrEMBL
    A0A6I9X1A1
    Conserved Domains (1) summary
    pfam00046
    Location:128 → 181
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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