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CNP 2',3'-cyclic nucleotide 3' phosphodiesterase [ Thamnophis sirtalis ]

Gene ID: 106538255, updated on 13-Mar-2024

Summary

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Gene symbol
CNP
Gene description
2',3'-cyclic nucleotide 3' phosphodiesterase
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657834.1 (279785..302134)

NW_013657834.1Genomic Context describing neighboring genes Neighboring gene ATP citrate lyase Neighboring gene outer dynein arm docking complex subunit 4 Neighboring gene DnaJ heat shock protein family (Hsp40) member C7 Neighboring gene NFKB inhibitor interacting Ras like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013657834.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cyclic nucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2',3'-cyclic-nucleotide 3'-phosphodiesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657834.1 Reference Thamnophis_sirtalis-6.0

    Range
    279785..302134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014052701.1 → XP_013908176.1  2',3'-cyclic-nucleotide 3'-phosphodiesterase

    UniProtKB/TrEMBL
    A0A6I9X1G2
    Conserved Domains (4) summary
    smart00382
    Location:54 → 146
    AAA; ATPases associated with a variety of cellular activities
    pfam05881
    Location:185 → 399
    CNPase; 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)
    cl17190
    Location:53 → 164
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
    cl21455
    Location:50 → 83
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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