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ATF7IP activating transcription factor 7 interacting protein [ Thamnophis sirtalis ]

Gene ID: 106537712, updated on 13-Mar-2024

Summary

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Gene symbol
ATF7IP
Gene description
activating transcription factor 7 interacting protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
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Genomic context

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See ATF7IP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657805.1 (260122..302945, complement)

NW_013657805.1Genomic Context describing neighboring genes Neighboring gene zeta-sarcoglycan Neighboring gene phospholipase B domain containing 1 Neighboring gene zinc finger protein 346-like Neighboring gene zinc finger protein 385D

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013657805.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA methylation-dependent heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activating transcription factor 7-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657805.1 Reference Thamnophis_sirtalis-6.0

    Range
    260122..302945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014051908.1 → XP_013907383.1  activating transcription factor 7-interacting protein 1

    UniProtKB/TrEMBL
    A0A6I9X7M8
    Conserved Domains (3) summary
    pfam05109
    Location:521 → 1034
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam16788
    Location:399 → 613
    ATF7IP_BD; ATF-interacting protein binding domain
    pfam16794
    Location:995 → 1095
    fn3_4; Fibronectin-III type domain
Nucleotide Protein
Heading Accession and Version

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