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ppp1r10 protein phosphatase 1, regulatory subunit 10 [ Austrofundulus limnaeus ]

Gene ID: 106531898, updated on 13-Mar-2024

Summary

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Gene symbol
ppp1r10
Gene description
protein phosphatase 1, regulatory subunit 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013953091.1 (118960..130329)

NW_013953091.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family F (GCN20), member 1 Neighboring gene uncharacterized LOC106531896 Neighboring gene mitochondrial ribosomal protein S18B Neighboring gene anterior gradient 2 Neighboring gene sclerostin domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013953091.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 1 regulatory subunit 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013953091.1 Reference Austrofundulus_limnaeus-1.0

    Range
    118960..130329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014027840.1 → XP_013883294.1  serine/threonine-protein phosphatase 1 regulatory subunit 10

    UniProtKB/TrEMBL
    A0A2I4CTI2
    Conserved Domains (2) summary
    pfam00642
    Location:760 → 784
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    cl00146
    Location:102 → 145
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  2. XM_014027841.1 → XP_013883295.1  serine/threonine-protein phosphatase 1 regulatory subunit 10

    UniProtKB/TrEMBL
    A0A2I4CTI2
    Conserved Domains (2) summary
    pfam00642
    Location:760 → 784
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    cl00146
    Location:102 → 145
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
Nucleotide Protein
Heading Accession and Version

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