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ufl1 UFM1-specific ligase 1 [ Austrofundulus limnaeus ]

Gene ID: 106531125, updated on 13-Mar-2024

Summary

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Gene symbol
ufl1
Gene description
UFM1-specific ligase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013953001.1 (137748..167756, complement)

NW_013953001.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106531127 Neighboring gene uncharacterized LOC106531123

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013953001.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UFM1 ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K69-linked ufmylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to endoplasmic reticulum stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 UFM1-protein ligase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013953001.1 Reference Austrofundulus_limnaeus-1.0

    Range
    137748..167756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014026908.1 → XP_013882362.1  E3 UFM1-protein ligase 1

    UniProtKB/TrEMBL
    A0A2I4CQU8
    Conserved Domains (1) summary
    pfam09743
    Location:7 → 275
    DUF2042; Uncharacterized conserved protein (DUF2042)
Nucleotide Protein
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