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eya4 EYA transcriptional coactivator and phosphatase 4 [ Austrofundulus limnaeus ]

Gene ID: 106524880, updated on 13-Mar-2024

Summary

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Gene symbol
eya4
Gene description
EYA transcriptional coactivator and phosphatase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952607.1 (272730..329755, complement)

NW_013952607.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106524903 Neighboring gene ribosomal protein S12 Neighboring gene tripartite motif-containing protein 35-like Neighboring gene transcription factor 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952607.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eyes absent homolog 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952607.1 Reference Austrofundulus_limnaeus-1.0

    Range
    272730..329755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014018885.1 → XP_013874339.1  eyes absent homolog 4 isoform X1

    UniProtKB/TrEMBL
    A0A2I4C2Z3
    Conserved Domains (2) summary
    TIGR01658
    Location:372 → 616
    EYA-cons_domain; eyes absent protein conserved domain
    pfam00702
    Location:374 → 618
    Hydrolase; haloacid dehalogenase-like hydrolase

  2. XM_014018890.1 → XP_013874344.1  eyes absent homolog 4 isoform X5

    UniProtKB/TrEMBL
    A0A2I4C2Z8
    Conserved Domains (2) summary
    TIGR01658
    Location:344 → 588
    EYA-cons_domain; eyes absent protein conserved domain
    pfam00702
    Location:346 → 590
    Hydrolase; haloacid dehalogenase-like hydrolase

  3. XM_014018893.1 → XP_013874347.1  eyes absent homolog 4 isoform X8

    UniProtKB/TrEMBL
    A0A2I4C2Y8
    Conserved Domains (1) summary
    TIGR01658
    Location:372 → 592
    EYA-cons_domain; eyes absent protein conserved domain

  4. XM_014018887.1 → XP_013874341.1  eyes absent homolog 4 isoform X3

    UniProtKB/TrEMBL
    A0A2I4C2W6
    Conserved Domains (1) summary
    TIGR01658
    Location:372 → 643
    EYA-cons_domain; eyes absent protein conserved domain

  5. XM_014018886.1 → XP_013874340.1  eyes absent homolog 4 isoform X2

    UniProtKB/TrEMBL
    A0A2I4C2X2
    Conserved Domains (2) summary
    TIGR01658
    Location:372 → 643
    EYA-cons_domain; eyes absent protein conserved domain
    pfam00702
    Location:374 → 619
    Hydrolase; haloacid dehalogenase-like hydrolase

  6. XM_014018892.1 → XP_013874346.1  eyes absent homolog 4 isoform X7

    UniProtKB/TrEMBL
    A0A2I4C2X0
    Conserved Domains (2) summary
    TIGR01658
    Location:344 → 615
    EYA-cons_domain; eyes absent protein conserved domain
    pfam00702
    Location:346 → 591
    Hydrolase; haloacid dehalogenase-like hydrolase

  7. XM_014018891.1 → XP_013874345.1  eyes absent homolog 4 isoform X6

    UniProtKB/TrEMBL
    A0A2I4C2X7
    Conserved Domains (2) summary
    TIGR01658
    Location:342 → 586
    EYA-cons_domain; eyes absent protein conserved domain
    pfam00702
    Location:344 → 588
    Hydrolase; haloacid dehalogenase-like hydrolase

  8. XM_014018889.1 → XP_013874343.1  eyes absent homolog 4 isoform X4

    UniProtKB/TrEMBL
    A0A2I4C2X1
    Conserved Domains (1) summary
    TIGR01658
    Location:372 → 617
    EYA-cons_domain; eyes absent protein conserved domain

RNA

  1. XR_001311042.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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