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tfb1m transcription factor B1, mitochondrial [ Austrofundulus limnaeus ]

Gene ID: 106519091, updated on 13-Mar-2024

Summary

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Gene symbol
tfb1m
Gene description
transcription factor B1, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952404.1 (2596138..2625016)

NW_013952404.1Genomic Context describing neighboring genes Neighboring gene cell cycle control protein 50A-like Neighboring gene filamin-A-interacting protein 1-like Neighboring gene claudin 20 Neighboring gene TIAM Rac1 associated GEF 2a Neighboring gene uncharacterized LOC106519145 Neighboring gene SR-related CTD-associated factor 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952404.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mitochondrial transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA (adenine-N6,N6-)-dimethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at mitochondrial promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dimethyladenosine transferase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952404.1 Reference Austrofundulus_limnaeus-1.0

    Range
    2596138..2625016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014010622.1 → XP_013866076.1  dimethyladenosine transferase 1, mitochondrial

    UniProtKB/TrEMBL
    A0A2I4BEB3
    Conserved Domains (1) summary
    PRK00274
    Location:15 → 308
    ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed

  2. XM_014010638.1 → XP_013866092.1  dimethyladenosine transferase 1, mitochondrial

    UniProtKB/TrEMBL
    A0A2I4BEB3
    Conserved Domains (1) summary
    PRK00274
    Location:15 → 308
    ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed

  3. XM_014010631.1 → XP_013866085.1  dimethyladenosine transferase 1, mitochondrial

    UniProtKB/TrEMBL
    A0A2I4BEB3
    Conserved Domains (1) summary
    PRK00274
    Location:15 → 308
    ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed
Nucleotide Protein
Heading Accession and Version

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