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rabep2 rabaptin, RAB GTPase binding effector protein 2 [ Austrofundulus limnaeus ]

Gene ID: 106516487, updated on 13-Mar-2024

Summary

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Gene symbol
rabep2
Gene description
rabaptin, RAB GTPase binding effector protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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See rabep2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952440.1 (137847..145901)

NW_013952440.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106516484 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 9 Neighboring gene ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 Neighboring gene Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952440.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab GTPase-binding effector protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952440.1 Reference Austrofundulus_limnaeus-1.0

    Range
    137847..145901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014006881.1 → XP_013862335.1  rab GTPase-binding effector protein 2

    UniProtKB/TrEMBL
    A0A2I4B3K7
    Conserved Domains (1) summary
    pfam09311
    Location:213 → 444
    Rab5-bind; Rabaptin-like protein
Nucleotide Protein
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