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rflnb refilin B [ Austrofundulus limnaeus ]

Gene ID: 106515501, updated on 13-Mar-2024

Summary

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Gene symbol
rflnb
Gene description
refilin B
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
zebrafish all
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Genomic context

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See rflnb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952431.1 (2540094..2543823, complement)

NW_013952431.1Genomic Context describing neighboring genes Neighboring gene tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like Neighboring gene tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like Neighboring gene VPS53 subunit of GARP complex Neighboring gene leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952431.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables filamin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of bone mineralization involved in bone maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of chondrocyte development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament bundle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
filamin-interacting protein FAM101B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952431.1 Reference Austrofundulus_limnaeus-1.0

    Range
    2540094..2543823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014005332.1 → XP_013860786.1  filamin-interacting protein FAM101B isoform X1

    UniProtKB/TrEMBL
    A0A2I4AZ73
    Conserved Domains (1) summary
    pfam15068
    Location:1 → 196
    FAM101; FAM101 family

  2. XM_014005333.1 → XP_013860787.1  filamin-interacting protein FAM101B isoform X2

    UniProtKB/TrEMBL
    A0A2I4AZ56
    Conserved Domains (1) summary
    pfam15068
    Location:1 → 198
    FAM101; FAM101 family

  3. XM_014005336.1 → XP_013860790.1  filamin-interacting protein FAM101B isoform X3

    UniProtKB/TrEMBL
    A0A2I4AZ88
    Conserved Domains (1) summary
    pfam15068
    Location:1 → 179
    FAM101; FAM101 family

  4. XM_014005334.1 → XP_013860788.1  filamin-interacting protein FAM101B isoform X3

    UniProtKB/TrEMBL
    A0A2I4AZ88
    Conserved Domains (1) summary
    pfam15068
    Location:1 → 179
    FAM101; FAM101 family

RNA

  1. XR_001310018.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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