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ALMS1 ALMS1 centrosome and basal body associated protein [ Apteryx mantelli mantelli ]

Gene ID: 106497796, updated on 13-Mar-2024

Summary

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Gene symbol
ALMS1
Gene description
ALMS1 centrosome and basal body associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli mantelli (sub-species: mantelli)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx; Apteryx mantelli
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current AptMant0 (GCF_001039765.1) Unplaced Scaffold NW_013988217.1 (139146..170205, complement)

NW_013988217.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106497750 Neighboring gene disintegrin and metalloproteinase domain-containing protein 33-like Neighboring gene early growth response 4 Neighboring gene F-box protein 41

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013988217.1 Unplaced Scaffold Reference AptMant0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Alstrom syndrome protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx australis mantelli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AptMant0

Genomic

  1. NW_013988217.1 Reference AptMant0

    Range
    139146..170205 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013958813.1 → XP_013814267.1  Alstrom syndrome protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B7JT63
    Conserved Domains (1) summary
    pfam15309
    Location:1168 → 1328
    ALMS_motif; ALMS motif

  2. XM_013958821.1 → XP_013814275.1  Alstrom syndrome protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B7JTF6
    Conserved Domains (1) summary
    pfam15309
    Location:1095 → 1255
    ALMS_motif; ALMS motif

  3. XM_013958805.1 → XP_013814259.1  Alstrom syndrome protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B7JU11
    Conserved Domains (1) summary
    pfam15309
    Location:1168 → 1299
    ALMS_motif; ALMS motif

  4. XM_013958836.1 → XP_013814290.1  Alstrom syndrome protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B7JTH1
    Conserved Domains (1) summary
    pfam15309
    Location:170 → 330
    ALMS_motif; ALMS motif

RNA

  1. XR_001294849.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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