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PER2 period circadian regulator 2 [ Apteryx mantelli mantelli ]

Gene ID: 106496184, updated on 13-Mar-2024

Summary

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Gene symbol
PER2
Gene description
period circadian regulator 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli mantelli (sub-species: mantelli)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx; Apteryx mantelli
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current AptMant0 (GCF_001039765.1) Unplaced Scaffold NW_014004928.1 (1384897..1418509, complement)

NW_014004928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106496182 Neighboring gene transcription cofactor HES-6-like Neighboring gene uncharacterized LOC106496185 Neighboring gene uncharacterized LOC106496167

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014004928.1 Unplaced Scaffold Reference AptMant0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
period circadian protein homolog 2
Names
period circadian clock 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx australis mantelli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AptMant0

Genomic

  1. NW_014004928.1 Reference AptMant0

    Range
    1384897..1418509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013956780.1 → XP_013812234.1  period circadian protein homolog 2

    UniProtKB/TrEMBL
    A0A8B7JNA3
    Conserved Domains (3) summary
    pfam08447
    Location:396 → 480
    PAS_3; PAS fold
    pfam12114
    Location:1130 → 1321
    Period_C; Period protein 2/3C-terminal region
    cl26464
    Location:912 → 1074
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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