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PLCD1 phospholipase C delta 1 [ Apteryx mantelli mantelli ]

Gene ID: 106494848, updated on 13-Mar-2024

Summary

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Gene symbol
PLCD1
Gene description
phospholipase C delta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli mantelli (sub-species: mantelli)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx; Apteryx mantelli
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current AptMant0 (GCF_001039765.1) Unplaced Scaffold NW_014004019.1 (225316..269591)

NW_014004019.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 3-like Neighboring gene acetyl-CoA acyltransferase 1 Neighboring gene DLEC1 cilia and flagella associated protein Neighboring gene villin like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014004019.1 Unplaced Scaffold Reference AptMant0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx australis mantelli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AptMant0

Genomic

  1. NW_014004019.1 Reference AptMant0

    Range
    225316..269591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013955177.1 → XP_013810631.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1

    UniProtKB/TrEMBL
    A0A8B7JHV7
    Conserved Domains (6) summary
    cd08629
    Location:273 → 576
    PI-PLCc_delta1; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1
    cd13363
    Location:1 → 118
    PH_PLC_delta; Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain
    pfam00169
    Location:9 → 108
    PH; PH domain
    pfam09279
    Location:192 → 273
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    pfam14788
    Location:138 → 187
    EF-hand_10; EF hand
    cl14603
    Location:609 → 658
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

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