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NDEL1 nudE neurodevelopment protein 1 like 1 [ Apteryx mantelli mantelli ]

Gene ID: 106493192, updated on 13-Mar-2024

Summary

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Gene symbol
NDEL1
Gene description
nudE neurodevelopment protein 1 like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli mantelli (sub-species: mantelli)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx; Apteryx mantelli
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current AptMant0 (GCF_001039765.1) Unplaced Scaffold NW_014002551.1 (878516..905707, complement)

NW_014002551.1Genomic Context describing neighboring genes Neighboring gene myosin heavy chain 10 Neighboring gene uncharacterized LOC106493190 Neighboring gene ring finger protein 222 Neighboring gene transmembrane protein 238

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014002551.1 Unplaced Scaffold Reference AptMant0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in centrosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromosome segregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of chromosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of mitotic spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic centrosome separation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of kinesin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear distribution protein nudE-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx australis mantelli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AptMant0

Genomic

  1. NW_014002551.1 Reference AptMant0

    Range
    878516..905707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013953187.1 → XP_013808641.1  nuclear distribution protein nudE-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B7JC54
    Conserved Domains (4) summary
    pfam04880
    Location:148 → 322
    NUDE_C; NUDE protein, C-terminal conserved region
    pfam12718
    Location:47 → 162
    Tropomyosin_1; Tropomyosin like
    pfam15898
    Location:104 → 190
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    cl03075
    Location:44 → 141
    GrpE; nucleotide exchange factor GrpE

  2. XM_013953189.1 → XP_013808643.1  nuclear distribution protein nudE-like 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B7JFD8
    Conserved Domains (3) summary
    pfam04880
    Location:148 → 322
    NUDE_C; NUDE protein, C-terminal conserved region
    pfam12718
    Location:47 → 162
    Tropomyosin_1; Tropomyosin like
    cl03075
    Location:48 → 138
    GrpE; nucleotide exchange factor GrpE

  3. XM_013953188.1 → XP_013808642.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B7JC42
    Conserved Domains (2) summary
    pfam04880
    Location:135 → 309
    NUDE_C; NUDE protein, C-terminal conserved region
    cl25732
    Location:27 → 193
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_013953185.1 → XP_013808639.1  nuclear distribution protein nudE-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B7JD46
    Conserved Domains (4) summary
    pfam04880
    Location:148 → 322
    NUDE_C; NUDE protein, C-terminal conserved region
    pfam12718
    Location:47 → 162
    Tropomyosin_1; Tropomyosin like
    pfam15898
    Location:104 → 190
    PRKG1_interact; cGMP-dependent protein kinase interacting domain
    cl03075
    Location:44 → 141
    GrpE; nucleotide exchange factor GrpE

  5. XM_013953190.1 → XP_013808644.1  nuclear distribution protein nudE-like 1 isoform X5

    UniProtKB/TrEMBL
    A0A8B7JD53
    Conserved Domains (3) summary
    pfam04880
    Location:148 → 322
    NUDE_C; NUDE protein, C-terminal conserved region
    pfam12718
    Location:47 → 162
    Tropomyosin_1; Tropomyosin like
    cl03075
    Location:48 → 138
    GrpE; nucleotide exchange factor GrpE
Nucleotide Protein
Heading Accession and Version

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