Mar181_2998 Exonuclease RNase T and DNA polymerase III [Marinomonas posidonica IVIA-Po-181] - Gene

Summary

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Gene symbol: Mar181_2998
Gene description: Exonuclease RNase T and DNA polymerase III
Locus tag: Mar181_2998
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Marinomonas posidonica IVIA-Po-181 (strain: IVIA-Po-181, nat-host: Posidonia oceanica (seagrass))
Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas

Genomic context

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Location :: country: Spain, isolation source: seagrass from different meadows in the coast of 76 Balearic Islands

Sequence :: NC_015559.1 (3313494..3314156, complement)

NC_015559.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence

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Bibliography

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GeneRIFs: Gene References Into Functions What's a GeneRIF?

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Pathways from BioSystems

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DNA polymerase III complex, bacteria, organism-specific biosystem (from KEGG)
DNA polymerase III complex, bacteria, organism-specific biosystemStructural complex; Genetic information processing; DNA polymerase
DNA polymerase III complex, bacteria, conserved biosystem (from KEGG)
DNA polymerase III complex, bacteria, conserved biosystemStructural complex; Genetic information processing; DNA polymerase
DNA replication, organism-specific biosystem (from KEGG)
DNA replication, organism-specific biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
DNA replication, conserved biosystem (from KEGG)
DNA replication, conserved biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
Homologous recombination, organism-specific biosystem (from KEGG)
Homologous recombination, organism-specific biosystemHomologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves...
Homologous recombination, conserved biosystem (from KEGG)
Homologous recombination, conserved biosystemHomologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves...
Mismatch repair, organism-specific biosystem (from KEGG)
Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
Mismatch repair, conserved biosystem (from KEGG)
Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
Purine metabolism, organism-specific biosystem (from KEGG)
Purine metabolism, organism-specific biosystem
Purine metabolism
Purine metabolism, conserved biosystem (from KEGG)
Purine metabolism, conserved biosystem
Purine metabolism
Pyrimidine metabolism, organism-specific biosystem (from KEGG)
Pyrimidine metabolism, organism-specific biosystem
Pyrimidine metabolism
Pyrimidine metabolism, conserved biosystem (from KEGG)
Pyrimidine metabolism, conserved biosystem
Pyrimidine metabolism

General gene information

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General protein information

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Names: Exonuclease RNase T and DNA polymerase III

YP_004482944.1

KEGG: pin:Ping_0265 exonuclease, RNase T and DNA polymerase III~PFAM: Exonuclease, RNase T/DNA polymerase III~SMART: Exonuclease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_015559.1

Range

3313494..3314156, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

YP_004482944.1 Exonuclease RNase T and DNA polymerase III [Marinomonas posidonica IVIA-Po-181]

Status: PROVISIONAL

UniProtKB/TrEMBL

F6D1D6

Conserved Domains (2) summary

COG0847
Location:18 – 173
Blast Score: 189

DnaQ; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair]

cd06127
Location:29 – 178
Blast Score: 281

DEDDh; DEDDh 3'-5' exonuclease domain family

Nucleotide		Protein
Heading	Accession and Version	Protein
genomic	CP002771.1	AEF56025.1

Additional links

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Gene LinkOut

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Molecular Biology Databases

Kyoto Encyclopedia of Genes and Genomes

PATRIC: PathoSystems Resource Integration Center

VBIMarPo2975_3059

Gene

Genes and mapped phenotypes

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Mar181_2998 Exonuclease RNase T and DNA polymerase III [ Marinomonas posidonica IVIA-Po-181 ]

Summary

Genomic context

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Pathways from BioSystems

General gene information

General protein information

NCBI Reference Sequences (RefSeq)

Genome Annotation

Reference assembly

Genomic

mRNA and Protein(s)

Additional links

Gene LinkOut

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