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TRNAA-UGC transfer RNA alanine (anticodon UGC) [ Thamnophis sirtalis ]

Gene ID: 106456606, updated on 12-Mar-2017

Summary

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Gene symbol
TRNAA-UGC
Gene description
transfer RNA alanine (anticodon UGC)
Gene type
tRNA
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Summary
This record serves to anchor the annotations of this class of tRNAs at multiple locations on the Thamnophis sirtalis genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 90
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Genomic context

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Location:
chromosome: Un
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013659023.1 (63302..63374) , (67976..68048, complement) , (59147..59219, complement)
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013660375.1 (56914..56985, complement)

NW_013660375.1Genomic Context describing neighboring genes Neighboring gene acid phosphatase 7, tartrate resistant (putative) Neighboring gene probable ATP-dependent RNA helicase DHX37 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene polyubiquitin-B

NW_013659023.1Genomic Context describing neighboring genes Neighboring gene interferon-inducible GTPase 5-like Neighboring gene transfer RNA alanine (anticodon AGC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013659023.1 Reference Thamnophis_sirtalis-6.0

    Range
    59147..59219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013659023.1 Reference Thamnophis_sirtalis-6.0

    Range
    63302..63374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013659023.1 Reference Thamnophis_sirtalis-6.0

    Range
    67976..68048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013660375.1 Reference Thamnophis_sirtalis-6.0

    Range
    56914..56985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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