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Eaf2 ELL associated factor 2 [ Mus musculus (house mouse) ]

Gene ID: 106389, updated on 28-May-2016
Official Symbol
Eaf2provided by MGI
Official Full Name
ELL associated factor 2provided by MGI
Primary source
MGI:MGI:2146616
See related
Ensembl:ENSMUSG00000022838 Vega:OTTMUSG00000024641
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
U19; Festa; Traits; FESTA-L; FESTA-S; AW048865
Orthologs
Location:
16; 16 B3
Exon count:
8
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 16 NC_000082.6 (36792884..36874826, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (36792970..36874912, complement)

Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene RNA guanylyltransferase and 5'-phosphatase pseudogene Neighboring gene solute carrier family 15 (H+/peptide transporter), member 2 Neighboring gene IQ calmodulin-binding motif containing 1 Neighboring gene RIKEN cDNA 4930565N06 gene Neighboring gene golgi autoantigen, golgin subfamily b, macrogolgin 1 Neighboring gene hematopoietic cell specific Lyn substrate 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
ELL-EAF complex IEA
Inferred from Electronic Annotation
more info
 
intracellular ISA
Inferred from Sequence Alignment
more info
PubMed 
nucleoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus ISA
Inferred from Sequence Alignment
more info
PubMed 
transcription elongation factor complex ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
ELL-associated factor 2
Names
ehrlich S-II transcriptional activator factor
testosterone regulated apoptosis inducer and tumor suppressor
testosterone-regulated apoptosis inducer and tumor suppressor protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113401.1NP_001106872.1  ELL-associated factor 2 isoform b

    See identical proteins and their annotated locations for NP_001106872.1

    Status: VALIDATED

    Source sequence(s)
    AC117662, AY034479, BG144504
    Consensus CDS
    CCDS49843.1
    UniProtKB/Swiss-Prot
    Q91ZD6
    Related
    ENSMUSP00000110477, OTTMUSP00000029552, ENSMUST00000114829, OTTMUST00000060572
    Conserved Domains (1) summary
    pfam09816
    Location:14116
    EAF; RNA polymerase II transcription elongation factor
  2. NM_001113405.1NP_001106876.1  ELL-associated factor 2 isoform a

    See identical proteins and their annotated locations for NP_001106876.1

    Status: VALIDATED

    Source sequence(s)
    AB081298, AC117662, AY049021
    Consensus CDS
    CCDS37335.1
    UniProtKB/Swiss-Prot
    Q91ZD6
    Related
    ENSMUSP00000110473, OTTMUSP00000029664, ENSMUST00000114825, OTTMUST00000060741
  3. NM_134111.2NP_598872.1  ELL-associated factor 2 isoform a

    See identical proteins and their annotated locations for NP_598872.1

    Status: VALIDATED

    Source sequence(s)
    BC056626
    Consensus CDS
    CCDS37335.1
    UniProtKB/Swiss-Prot
    Q91ZD6
    Related
    ENSMUSP00000075331, OTTMUSP00000029663, ENSMUST00000075946, OTTMUST00000060740

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000082.6 Reference GRCm38.p3 C57BL/6J

    Range
    36792884..36874826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006521685.2XP_006521748.1  

    See identical proteins and their annotated locations for XP_006521748.1

    UniProtKB/Swiss-Prot
    Q91ZD6
  2. XM_006521684.2XP_006521747.1  

    See identical proteins and their annotated locations for XP_006521747.1

    UniProtKB/Swiss-Prot
    Q91ZD6
  3. XM_006521682.2XP_006521745.1  

    See identical proteins and their annotated locations for XP_006521745.1

    UniProtKB/TrEMBL
    K4DI60
    Related
    ENSMUSP00000023537, OTTMUSP00000029665, ENSMUST00000023537, OTTMUST00000060573
    Conserved Domains (1) summary
    pfam09816
    Location:14116
    EAF; RNA polymerase II transcription elongation factor
  4. XM_006521686.1XP_006521749.1  

    See identical proteins and their annotated locations for XP_006521749.1

    UniProtKB/Swiss-Prot
    Q91ZD6
  5. XM_006521683.1XP_006521746.1  

    See identical proteins and their annotated locations for XP_006521746.1

    UniProtKB/Swiss-Prot
    Q91ZD6
  6. XM_011245800.1XP_011244102.1  

    See identical proteins and their annotated locations for XP_011244102.1

    Conserved Domains (1) summary
    pfam09816
    Location:14116
    EAF; RNA polymerase II transcription elongation factor
  7. XM_011245799.1XP_011244101.1  

    See identical proteins and their annotated locations for XP_011244101.1

    Conserved Domains (1) summary
    pfam09816
    Location:14116
    EAF; RNA polymerase II transcription elongation factor

Alternate Mm_Celera

Genomic

  1. AC_000038.1 Alternate Mm_Celera

    Range
    37203320..37285700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)