U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

APTX aprataxin [ Anser cygnoides (Swan goose) ]

Gene ID: 106040205, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
APTX
Gene description
aprataxin
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927929.1 (117783..127269, complement)

NW_025927929.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 2 Neighboring gene elongator acetyltransferase complex subunit 1 Neighboring gene actin like 7B Neighboring gene DnaJ heat shock protein family (Hsp40) member A1 Neighboring gene SMU1 DNA replication regulator and spliceosomal factor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_025927929 Unplaced Scaffold Reference GooseV1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA 5'-adenosine monophosphate hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mismatched DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-strand break-containing DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in single strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
aprataxin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Anser cygnoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GooseV1.0 Primary Assembly

Genomic

  1. NW_025927929.1 Reference GooseV1.0 Primary Assembly

    Range
    117783..127269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048051772.1 → XP_047907729.1  aprataxin

    UniProtKB/TrEMBL
    A0A8B9E331
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.