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USP53 ubiquitin specific peptidase 53 [ Anser cygnoides (Swan goose) ]

Gene ID: 106038662, updated on 13-Mar-2024

Summary

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Gene symbol
USP53
Gene description
ubiquitin specific peptidase 53
See related
EnsemblRapid:ENSACDG00000011744
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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See USP53 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927734.1 (4093034..4131657)

NW_025927734.1Genomic Context describing neighboring genes Neighboring gene protein transport protein Sec24D-like Neighboring gene synaptopodin 2 Neighboring gene uncharacterized LOC125184061 Neighboring gene myozenin 2 Neighboring gene fatty acid binding protein 2 Neighboring gene phosphodiesterase 5A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025927734 Unplaced Scaffold Reference GooseV1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to auditory stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of sound IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive ubiquitin carboxyl-terminal hydrolase 53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anser cygnoides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GooseV1.0 Primary Assembly

Genomic

  1. NW_025927734.1 Reference GooseV1.0 Primary Assembly

    Range
    4093034..4131657
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048074546.1 → XP_047930503.1  inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X2

  2. XM_048074542.1 → XP_047930499.1  inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1

    UniProtKB/TrEMBL
    A0A8B9ECE3

  3. XM_048074543.1 → XP_047930500.1  inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1

    UniProtKB/TrEMBL
    A0A8B9ECE3

  4. XM_048074545.1 → XP_047930502.1  inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1

    UniProtKB/TrEMBL
    A0A8B9ECE3

  5. XM_048074544.1 → XP_047930501.1  inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1

    UniProtKB/TrEMBL
    A0A8B9ECE3

  6. XM_013185349.2 → XP_013040803.2  inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1

    UniProtKB/TrEMBL
    A0A8B9ECE3
Nucleotide Protein
Heading Accession and Version

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